Cell_line_ID	Fusion_Name	Gene (1)	Chr (1)	Genomic position hg19 (1)	Gene (2)	Chr (2)	Genomic position hg19 (2)	Spanning_reads	Spanning_pairs	Spanning_pairs_in_fusion	thf_score	Orientation	Sens_gene	Consistance_fusion	Fusion_type	Cancer Gene Census (RELEASE nov 2017)	HCC driver gene
HepG2	NFS1--PHF20	NFS1	chr20	34278332	PHF20	chr20	34389268	6	10	4	364.69	r/r	-/+	inverted	DUP	No	No
HepG2	LMO7--UCHL3	LMO7	chr13	76210861	UCHL3	chr13	76178904	7	6	6	275.89	f/f	+/+	straight	DUP	No	No
HepG2	LOC407835--MAP2K2	MAP2K2	chr19	4110356	LOC407835	chr7	128767018	5	11	1	17.48	r/f	-/NA	NA	TRANS	Yes	No
Hep3B	AURKA--CSTF1	AURKA	chr20	54966034	CSTF1	chr20	54974412	14	2	7	378.28	r/r	-/+	inverted	DUP	No	No
Hep3B	LOC101927870--PHF21A	PHF21A	chr11	45957289	LOC101927870	chr7	103151297	36	7	28	472.5	f/f	-/NA	NA	TRANS	No	No
Hep3B	DPYD--GDAP2	DPYD	chr1	98361295	GDAP2	chr1	118438160	24	18	29	532.69	r/f	-/-	inverted	INV	No	No
Hep3B	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	3	4	3	283.73	r/r	-/-	straight	DEL	No	No
Hep3B	HORMAD2--NF2	NF2	chr22	30054252	HORMAD2	chr22	30572051	19	7	16	409.94	f/f	+/+	straight	DEL	Yes	No
Hep3B	IGF2BP2--TFEB	IGF2BP2	chr3	185540940	TFEB	chr6	41658972	50	22	58	576.51	r/r	-/-	straight	TRANS	Yes	No
HepaRG	PAWR--SYT1	SYT1	chr12	79787704	PAWR	chr12	79986390	7	4	4	328.6	f/f	+/-	inverted	DEL	No	No
HepaRG	LOC407835--MAP2K2	MAP2K2	chr19	4110356	LOC407835	chr7	128767018	2	37	1	47.56	r/f	-/NA	NA	TRANS	Yes	No
HepaRG	AL121578.2--SYTL5	AL121578.2	chrX	37808657	SYTL5	chrX	37913465	5	2	3	298.03	f/f	+/+	straight	DEL	No	No
HepaRG	FPGS--PIP5KL1	FPGS	chr9	130575557	PIP5KL1	chr9	130684459	29	40	31	517.66	f/f	+/-	inverted	DEL	No	No
HepaRG	BCL7B--TBL2	BCL7B	chr7	72957876	TBL2	chr7	72988841	5	7	0	564.68	r/r	-/-	straight	DUP	No	No
B1	PUDP--STS	PUDP	chrX	7065642	STS	chrX	7171236	4	14	4	417.05	f/f	NA/+	NA	DEL	No	No
B1	CARD18--RP11-94P11.4	RP11-94P11.4	chr11	105130368	CARD18	chr11	105009804	4	3	4	289.54	r/r	-/-	straight	DEL	No	No
B1	FBXO33--GNG2	FBXO33	chr14	39900767	GNG2	chr14	52364156	8	19	3	323.08	r/r	-/+	inverted	DUP	No	No
HCC-1.2	EP300--LINC01181	EP300	chr22	41548353	LINC01181	chr8	104144820	14	11	21	371.06	f/f	+/NA	NA	TRANS	Yes	No
HCC-1.2	DAGLA--STAM	STAM	chr10	17738701	DAGLA	chr11	61490431	9	2	9	395.61	f/r	+/+	inverted	TRANS	No	No
HCC-1.2	DSCR4--KCNJ6	DSCR4	chr21	39492400	KCNJ6	chr21	39213010	4	4	4	325.25	r/r	-/-	straight	DEL	No	No
HCC-1.2	SLC26A4--ST7-OT3	ST7-OT3	chr7	116849990	SLC26A4	chr7	107350498	18	16	1	453.11	f/f	NA/+	NA	DUP	No	No
HCC-1.2	LOC407835--MAP2K2	MAP2K2	chr19	4110356	LOC407835	chr7	128767018	10	53	5	203.49	r/f	-/NA	NA	TRANS	Yes	No
HCC-1.2	SLC36A1--SLC36A2	SLC36A2	chr5	150724294	SLC36A1	chr5	150838348	53	32	25	277.41	f/f	-/+	inverted	DEL	No	No
HCC-1.2	CPPED1--KIAA0556	CPPED1	chr16	12756077	KIAA0556	chr16	27660055	7	5	0	399.58	r/r	-/+	inverted	DUP	No	No
HCC-1.2	RP11-179A16.1--TENM4	RP11-179A16.1	chr11	82114720	TENM4	chr11	78437266	5	6	5	-30	r/r	-/-	straight	DEL	No	No
HCC-1.2	ELL2--LOC101929710	ELL2	chr5	95231331	LOC101929710	chr5	95465180	143	154	0	491.44	r/r	-/NA	NA	DUP	No	No
HCC-1.2	DLEU1--DLEU7	DLEU1	chr13	51007685	DLEU7	chr13	51286673	3	4	3	320.32	f/f	+/-	inverted	DEL	No	No
HCC-3	ATF2--CHN1	ATF2	chr2	175945387	CHN1	chr2	175816929	7	3	2	280.16	r/r	-/-	straight	DEL	Yes	No
HCC-3	GOLGA5--RIN3	GOLGA5	chr14	93286180	RIN3	chr14	93142819	6	9	0	315.44	f/f	+/+	straight	DUP	Yes	No
HCC-3	LINC01226--LOC101927895	LOC101927895	chr1	19537052	LINC01226	chr1	31987625	9	2	7	-88.01	f/f	NA/NA	NA	DEL	No	No
HCC-3	LSAMP--RP11-384F7.2	RP11-384F7.2	chr3	117716028	LSAMP	chr3	115805402	6	16	7	402.55	r/r	-/-	straight	DEL	No	No
HCC-3	DYNLT3--RPS6KA3	RPS6KA3	chrX	20252875	DYNLT3	chrX	37701157	496	200	0	1271.85	r/r	-/-	straight	DUP	No	Yes
HCC-3	SBF2--SWAP70	SBF2	chr11	9917489	SWAP70	chr11	9715692	14	4	8	432.18	r/f	-/+	straight	INV	No	No
HCC-3	ESPNP--RCC2	ESPNP	chr1	17022376	RCC2	chr1	17735559	56	194	39	329	r/f	-/-	inverted	INV	No	No
HCC-3	LINC02027--LINC02050	LINC02050	chr3	80820105	LINC02027	chr3	81144262	9	17	7	435.51	f/f	NA/NA	NA	DEL	No	No
HCC-3	PREX1--RP5-906C1.1	RP5-906C1.1	chr20	47465971	PREX1	chr20	47364416	18	3	13	420.22	r/r	NA/-	NA	DEL	No	No
HCC-3	CDH7--RP11-775G23.1	RP11-775G23.1	chr18	63310004	CDH7	chr18	63429882	20	17	14	511.38	f/f	+/+	straight	DEL	No	No
HCC-3	LUC7L--SDHB	SDHB	chr1	17380442	LUC7L	chr16	258186	101	37	14	361.22	r/r	-/-	straight	TRANS	Yes	No
HCC-3	KRT28--PTGES3L-AARSD1	PTGES3L-AARSD1	chr17	41116122	KRT28	chr17	38955208	44	78	58	661.24	r/r	-/-	straight	DEL	No	No
HCC-1.1	PPP2R5C--TECPR2	TECPR2	chr14	102843274	PPP2R5C	chr14	102360841	13	15	0	493.23	f/f	+/+	straight	DUP	No	No
HCC-1.1	AKAP2--PALM2-AKAP2	PALM2-AKAP2	chr9	112778265	AKAP2	chr9	112898406	2	61	1	400.97	f/f	+/+	straight	DEL	No	No
HCC-1.1	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	3	5	3	332.67	f/f	NA/+	NA	DEL	No	No
HCC-1.1	DNAJB9--FOXP2	DNAJB9	chr7	108212384	FOXP2	chr7	114174669	4	4	5	232.27	f/f	+/+	straight	DEL	No	No
HCC-1.1	RP11-634B7.4--TRIM58	RP11-634B7.4	chr1	247803730	TRIM58	chr1	248023918	5	8	3	317.84	f/f	+/+	straight	DEL	No	No
HCC-1.1	AXIN1--MPG	MPG	chr16	133254	AXIN1	chr16	380756	6	9	6	334.68	f/f	+/-	inverted	DEL	Yes	Yes
HCC-1.1	LDB2--RP11-446J8.1	RP11-446J8.1	chr4	16428062	LDB2	chr4	16540506	8	2	4	481.1	f/f	+/-	inverted	DEL	No	No
HCC-1.1	AXIN1--RHBDF1	AXIN1	chr16	396147	RHBDF1	chr16	115036	9	35	10	454.62	r/r	-/-	straight	DEL	Yes	Yes
HCC-1.1	CHSY1--LRRK1	LRRK1	chr15	101590983	CHSY1	chr15	101775286	3	4	3	417.08	f/f	+/-	inverted	DEL	No	No
SNU182	GNB1L--SEPT5-GP1BB	GNB1L	chr22	19794181	SEPT5-GP1BB	chr22	19707124	18	9	17	322.2	r/f	-/NA	NA	INV	No	No
SNU182	CKB--TRMT61A	CKB	chr14	103986200	TRMT61A	chr14	103995934	7	7	6	163.64	r/r	-/+	inverted	DUP	No	No
SNU182	PGM5P4--PTCD3	PTCD3	chr2	86352204	PGM5P4	chr2	114317604	28	19	23	333.21	f/r	+/NA	NA	INV	No	No
SNU182	GREB1L--TULP3	GREB1L	chr18	18983954	TULP3	chr12	3029928	23	10	5	547.15	f/f	+/+	straight	TRANS	No	No
SNU182	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	12	53	7	451.23	r/r	-/-	straight	DEL	No	No
SNU182	SKP2--TTC23L	SKP2	chr5	36177393	TTC23L	chr5	34845591	10	9	6	336.35	f/f	+/+	straight	DUP	No	No
SNU182	CTD-2334D19.1--PRR16	PRR16	chr5	119800339	CTD-2334D19.1	chr5	120125648	5	2	6	95.44	f/f	+/+	straight	DEL	No	No
SNU182	AL121578.2--SYTL5	AL121578.2	chrX	37765861	SYTL5	chrX	37913465	19	54	12	539.87	f/f	+/+	straight	DEL	No	No
SNU182	AHSP--USP43	USP43	chr17	9549452	AHSP	chr16	31539456	48	6	48	37.9	f/f	+/+	straight	TRANS	No	No
SNU182	PRICKLE1--RP11-547C5.2	PRICKLE1	chr12	42864047	RP11-547C5.2	chr12	43373202	13	4	0	429.38	r/r	-/-	straight	DUP	No	No
SNU182	RNF5--RNF5P1	RNF5	chr6	32146568	RNF5P1	chr8	38458580	2	15	1	-41.8	f/r	+/-	straight	TRANS	No	No
SNU387	C6orf106--SRPK1	C6orf106	chr6	34628282	SRPK1	chr6	35837943	11	12	15	392.04	r/f	-/-	inverted	INV	No	No
SNU387	AL121578.2--SYTL5	AL121578.2	chrX	37808657	SYTL5	chrX	37913465	6	2	2	375.55	f/f	+/+	straight	DEL	No	No
SNU387	MYLPF--ZNF771	ZNF771	chr16	30419512	MYLPF	chr16	30386140	32	23	26	590.81	f/f	+/+	straight	DUP	No	No
SNU398	ARHGAP33--SBSN	SBSN	chr19	36017724	ARHGAP33	chr19	36275218	6	2	3	242.04	r/r	-/+	inverted	DUP	No	No
SNU398	CIB3--LINC00662	LINC00662	chr19	28283907	CIB3	chr19	16275723	49	38	46	557.36	r/r	-/-	straight	DEL	No	No
SNU398	ABCA12--LOC101928103	LOC101928103	chr2	215698828	ABCA12	chr2	215826533	10	6	10	387.25	f/f	NA/-	NA	DEL	No	No
SNU398	AHCY--MSANTD2	MSANTD2	chr11	124636576	AHCY	chr20	32891159	10	11	4	353.42	r/r	-/-	straight	TRANS	No	No
SNU398	SREBF2--UBA2	UBA2	chr19	34951470	SREBF2	chr22	42242210	17	6	22	373.8	f/r	+/+	inverted	TRANS	No	No
SNU398	SIN3B--ZNF121	ZNF121	chr19	9694861	SIN3B	chr19	16980270	112	7	96	335.02	r/f	-/+	straight	INV	No	No
SNU398	NETO2--SHCBP1	SHCBP1	chr16	46649857	NETO2	chr16	47117711	9	4	4	586.82	r/r	-/-	straight	DUP	No	No
SNU398	NFIC--PIP5K1C	PIP5K1C	chr19	3638881	NFIC	chr19	3381709	8	4	10	369.16	r/f	-/+	straight	INV	No	No
SNU398	PARD3--PLEKHA2	PARD3	chr10	34985244	PLEKHA2	chr8	38826110	34	19	38	575.11	r/f	-/+	straight	TRANS	No	No
SNU398	PTK2--RP11-1084E5.1	RP11-1084E5.1	chr8	110043858	PTK2	chr8	141874410	4	3	4	319.41	r/f	-/-	inverted	INV	No	No
SNU398	DMKN--KMT2B	KMT2B	chr19	36224772	DMKN	chr19	36004083	5	4	5	388	f/r	+/-	straight	INV	No	No
SNU398	KDM4C--PARD6G	KDM4C	chr9	7015928	PARD6G	chr18	77960814	18	5	23	385.08	f/r	+/-	straight	TRANS	No	No
SNU398	LOC730183--RNF40	RNF40	chr16	30778129	LOC730183	chr16	30709251	181	134	231	454.69	f/r	+/NA	NA	INV	No	No
SNU398	SNAP91--ZNF680	ZNF680	chr7	64004084	SNAP91	chr6	84320395	19	9	15	438.65	r/r	-/-	straight	TRANS	No	No
SNU398	DCTN4--NECTIN2	NECTIN2	chr19	45363321	DCTN4	chr5	150121673	28	5	5	216.29	f/f	NA/-	NA	TRANS	No	No
SNU423	ACTR3--SAG	ACTR3	chr2	114674584	SAG	chr2	234225347	61	43	56	372.86	f/r	+/+	inverted	INV	No	No
SNU423	ABCA12--LOC101928103	LOC101928103	chr2	215698828	ABCA12	chr2	215826533	5	3	3	293.57	f/f	NA/-	NA	DEL	No	No
SNU449	ABCA12--LOC101928103	LOC101928103	chr2	215698828	ABCA12	chr2	215826533	5	4	4	255.9	f/f	NA/-	NA	DEL	No	No
SNU449	EYS--HELLS	HELLS	chr10	96306254	EYS	chr6	64791894	10	6	8	398.44	f/r	+/-	straight	TRANS	No	Yes
SNU449	LINC02246--NRIP1	NRIP1	chr21	16415815	LINC02246	chr21	16230028	6	2	8	373.67	r/r	-/NA	NA	DEL	No	No
SNU475	GPR143--TBL1X	TBL1X	chrX	9469888	GPR143	chrX	9727336	14	2	4	167.44	f/f	+/-	inverted	DEL	No	No
SNU475	LINC01478--LINC01601	LINC01478	chr18	41906446	LINC01601	chr18	42129442	16	7	16	360.62	f/f	NA/NA	NA	DEL	No	No
Huh7	MBLAC2--PHF20	PHF20	chr20	34519365	MBLAC2	chr5	89767563	13	5	15	516.86	f/f	+/-	inverted	TRANS	No	No
Huh7	GAREM1--SDHAF3	GAREM1	chr18	29890155	SDHAF3	chr7	96810323	46	25	34	546.03	r/f	NA/NA	NA	TRANS	No	No
Huh7	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	3	14	1	340.44	r/r	-/-	straight	DEL	No	No
Huh7	LTN1--USP16	LTN1	chr21	30337085	USP16	chr21	30415348	44	18	22	633.55	r/r	-/+	inverted	DUP	No	No
Huh7	ANAPC5--ATP6V0A2	ANAPC5	chr12	121747503	ATP6V0A2	chr12	124219049	11	8	1	475.57	r/r	-/+	inverted	DUP	No	No
Huh7	CCSER1--SNCA	CCSER1	chr4	91048981	SNCA	chr4	90756842	9	2	7	288.96	f/r	+/-	straight	INV	No	No
Huh7	PACS1--RTN3	RTN3	chr11	63449249	PACS1	chr11	65960956	20	6	12	459.13	f/f	+/+	straight	DEL	No	No
Huh7	TMEM132E--ZNF274	TMEM132E	chr17	32920768	ZNF274	chr19	58698408	91	36	100	766.78	f/r	+/+	inverted	TRANS	No	No
Huh7	ATP6V0D1--RBM19	ATP6V0D1	chr16	67514859	RBM19	chr12	114296700	8	4	6	146.73	r/r	-/-	straight	TRANS	No	No
Huh7	CMB9-22P13.2--TRMT10C	TRMT10C	chr3	101280847	CMB9-22P13.2	chr11	65255089	223	82	216	470.56	f/r	+/NA	NA	TRANS	No	No
Huh7	RC3H1--SERPINC1	SERPINC1	chr1	173883690	RC3H1	chr1	173908008	8	4	2	285.87	r/r	-/-	straight	DUP	No	No
Huh7	IGFBP7--PCAT4	IGFBP7	chr4	57976066	PCAT4	chr4	80782444	3	4	3	-136.98	r/f	-/+	straight	INV	No	No
Huh7	PLOD2--PLSCR4	PLOD2	chr3	145820541	PLSCR4	chr3	145924547	8	7	3	329.12	r/r	-/-	straight	DUP	No	No
Huh7	ANKIB1--PTPRN2	ANKIB1	chr7	91991586	PTPRN2	chr7	158149783	17	2	15	316.37	f/r	+/-	straight	INV	No	No
Huh7	FIP1L1--RP11-25H12.1	FIP1L1	chr4	54266005	RP11-25H12.1	chr4	66891216	37	6	16	462.23	f/f	+/+	straight	DEL	Yes	No
Huh7	PHF24--SDHAF3	SDHAF3	chr7	96747208	PHF24	chr9	34971291	4	5	5	93.2	f/f	NA/NA	NA	TRANS	No	No
Huh7	ANO3--SLC5A12	ANO3	chr11	26587442	SLC5A12	chr11	26705303	41	21	31	583.02	f/f	+/-	inverted	DEL	No	No
Huh7	DTX2P1-UPK3BP1-PMS2P11--PIEZO2	PIEZO2	chr18	11026244	DTX2P1-UPK3BP1-PMS2P11	chr7	76617298	10	2	9	197.5	r/r	-/+	inverted	TRANS	No	No
Huh7	CARD18--RP11-94P11.4	RP11-94P11.4	chr11	105130368	CARD18	chr11	105009804	18	2	17	398.63	r/r	-/-	straight	DEL	No	No
Huh7	CNN2--WDR18	CNN2	chr19	1036244	WDR18	chr19	989761	27	18	6	593.49	f/f	+/+	straight	DUP	No	No
Huh7	APAF1--MED13L	MED13L	chr12	116714864	APAF1	chr12	99080525	97	17	56	86.26	r/f	-/+	straight	INV	No	No
Huh7	ABL1--MBLAC2	MBLAC2	chr5	89767563	ABL1	chr9	133710911	8	4	7	169.64	r/r	-/+	inverted	TRANS	Yes	No
Huh7	SORD--TERB2	SORD	chr15	45315546	TERB2	chr15	45249093	26	23	5	266.03	f/f	+/NA	NA	DUP	No	No
Huh7	CYB5R3--KDELC2	KDELC2	chr11	108344081	CYB5R3	chr22	43015392	8	4	7	668.77	r/f	-/-	inverted	TRANS	No	No
Huh7	LMNTD1--USP34	USP34	chr2	61515811	LMNTD1	chr12	25702479	8	2	6	312.46	r/r	-/NA	NA	TRANS	No	No
Mahlavu	GCC2--LIMS1	GCC2	chr2	109068921	LIMS1	chr2	109300340	86	78	108	867.01	f/f	+/+	straight	DEL	No	No
Mahlavu	PLPP1--SKIV2L2	SKIV2L2	chr5	54711959	PLPP1	chr5	54826351	4	6	3	104.1	f/f	+/NA	NA	DEL	No	No
Mahlavu	FBXW8--ISCU	ISCU	chr12	108962778	FBXW8	chr12	117449252	18	6	23	70.6	f/r	+/+	inverted	INV	No	No
Mahlavu	PAWR--SYT1	SYT1	chr12	79787704	PAWR	chr12	79988108	6	9	9	334.66	f/f	+/-	inverted	DEL	No	No
Mahlavu	PTPRO--RERG	RERG	chr12	15274052	PTPRO	chr12	15490310	9	4	1	484.54	f/f	-/+	inverted	DEL	No	No
Mahlavu	DEPDC1B--PDE4D	DEPDC1B	chr5	59934576	PDE4D	chr5	59284543	6	5	8	293.57	r/r	-/-	straight	DEL	No	No
Mahlavu	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	3	8	4	275.64	f/f	NA/+	NA	DEL	No	No
Mahlavu	IFI35--NBR1	IFI35	chr17	41158984	NBR1	chr17	41348497	28	25	32	400.14	f/f	+/+	straight	DEL	No	No
Mahlavu	IRAK4--ZCRB1	ZCRB1	chr12	42717820	IRAK4	chr12	44159377	16	47	7	422.13	r/r	-/+	inverted	DUP	No	No
Mahlavu	HKR1--ZNF540	HKR1	chr19	37815166	ZNF540	chr19	38102413	12	3	10	350.67	f/f	+/+	straight	DEL	No	No
Mahlavu	C12orf40--RP11-542G1.1	RP11-542G1.1	chr4	76233336	C12orf40	chr12	40258563	8	6	4	232.33	r/f	-/+	straight	TRANS	No	No
Mahlavu	EFNA5--TUB	EFNA5	chr5	107006189	TUB	chr11	8111156	13	10	9	513.02	r/f	-/+	straight	TRANS	No	No
PLC/PRF5	HNF1A--POP5	POP5	chr12	121017725	HNF1A	chr12	121418446	11	17	12	373.17	f/f	-/+	inverted	DEL	Yes	Yes
PLC/PRF5	ATF1--LINC00592	ATF1	chr12	51174020	LINC00592	chr12	52617229	10	30	14	507.39	f/f	+/+	straight	DEL	Yes	No
PLC/PRF5	LDB2--RP11-446J8.1	RP11-446J8.1	chr4	16428062	LDB2	chr4	16547485	16	2	1	299.94	f/f	+/-	inverted	DEL	No	No
PLC/PRF5	GATAD2A--ZNF675	GATAD2A	chr19	19496946	ZNF675	chr19	23730888	66	6	11	252.21	f/f	+/-	inverted	DEL	No	No
PLC/PRF5	ARMC6--SUGP2	SUGP2	chr19	19129917	ARMC6	chr19	19153519	114	89	56	682.51	r/f	-/+	straight	INV	No	No
PLC/PRF5	INSL6--JAK2	JAK2	chr9	4992273	INSL6	chr9	5164178	3	10	1	231.34	f/f	+/-	inverted	DEL	Yes	Yes
PLC/PRF5	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	4	8	3	283.45	r/r	-/-	straight	DEL	No	No
PLC/PRF5	ATF1--KRT80	ATF1	chr12	51174020	KRT80	chr12	52581303	6	5	4	50.84	f/f	+/-	inverted	DEL	Yes	No
HLE	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	2	10	4	509	f/f	NA/+	NA	DEL	No	No
HLE	RB1--RCBTB2	RB1	chr13	48955578	RCBTB2	chr13	49070722	42	68	40	279.06	f/f	+/-	inverted	DEL	Yes	Yes
HLE	LDB2--RP11-446J8.1	RP11-446J8.1	chr4	16428062	LDB2	chr4	16547485	8	2	1	370.86	f/f	+/-	inverted	DEL	No	No
HLE	RPLP2--SLC35F2	RPLP2	chr11	812586	SLC35F2	chr11	107779403	2	62	1	-144.39	f/f	+/-	inverted	DEL	No	No
HLE	SEPT9--VAC14	VAC14	chr16	70744521	set-09	chr17	75398784	5	28	6	378.15	r/r	-/+	inverted	TRANS	Yes	No
HLE	ALG1--PARD3B	ALG1	chr16	5117334	PARD3B	chr2	205830045	4	10	2	333.19	f/r	+/+	inverted	TRANS	No	No
HLE	CTD-2334D19.1--PRR16	PRR16	chr5	119800339	CTD-2334D19.1	chr5	120125648	4	4	2	164.46	f/f	+/+	straight	DEL	No	No
HLE	PTPRO--RERG	RERG	chr12	15274052	PTPRO	chr12	15490310	11	18	1	724.41	f/f	-/+	inverted	DEL	No	No
HLE	RP11-634B7.4--TRIM58	RP11-634B7.4	chr1	247803730	TRIM58	chr1	248023918	8	5	3	424.8	f/f	+/+	straight	DEL	No	No
HLE	ANKS1B--IKBIP	ANKS1B	chr12	99446934	IKBIP	chr12	99028190	2	7	1	383.16	r/r	-/-	straight	DEL	No	No
HLE	OGFOD3--SEPT9	OGFOD3	chr17	80373273	set-09	chr17	75478225	59	20	31	266.32	r/f	-/+	straight	INV	Yes	No
HLE	AANAT--TBCD	TBCD	chr17	80828255	AANAT	chr17	74458397	11	6	5	367.83	f/f	+/+	straight	DUP	No	No
HLE	LOC100506083--WWP2	WWP2	chr16	69833197	LOC100506083	chr16	70376001	4	2	4	368.89	f/r	+/NA	NA	INV	No	No
HLE	LINC01572--SEPT9	LINC01572	chr16	72556451	set-09	chr17	75398140	3	11	2	354.5	r/f	NA/+	NA	TRANS	Yes	No
HLE	LLGL2--SNHG16	SNHG16	chr17	74553938	LLGL2	chr17	73569094	385	200	240	686.28	f/f	+/+	straight	DUP	No	No
HLE	CCDC3--OPTN	CCDC3	chr10	13137214	OPTN	chr10	13154634	3	6	1	191.05	r/r	-/+	inverted	DUP	No	No
HLE	KATNB1--VAC14	KATNB1	chr16	57778422	VAC14	chr16	70820267	7	4	8	468.12	f/r	+/-	straight	INV	No	No
HLE	ERC1--WNK1	WNK1	chr12	863489	ERC1	chr12	1553727	307	200	265	753.42	f/f	+/+	straight	DEL	Yes	No
HLE	MINOS1-NBL1--RPS14	RPS14	chr5	149826442	MINOS1-NBL1	chr1	19934902	7	48	5	63.76	r/f	-/+	straight	TRANS	No	No
HLE	GAB2--NARS2	NARS2	chr11	78270584	GAB2	chr11	77991946	13	8	6	438.42	r/r	-/-	straight	DEL	No	No
HLE	LINC01478--LINC01601	LINC01478	chr18	41906446	LINC01601	chr18	42129442	17	18	17	513.41	f/f	NA/NA	NA	DEL	No	No
HLF	CCDC157--RP3-438O4.4	RP3-438O4.4	chr22	30602973	CCDC157	chr22	30753120	10	4	4	254.97	r/r	-/+	inverted	DUP	No	No
HLF	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	6	2	7	450.5	f/f	NA/+	NA	DEL	No	No
HLF	RB1--RCBTB2	RB1	chr13	48955578	RCBTB2	chr13	49070722	58	96	63	300.42	f/f	+/-	inverted	DEL	Yes	Yes
HLF	RP11-634B7.4--TRIM58	RP11-634B7.4	chr1	247803730	TRIM58	chr1	248023918	5	7	4	268.21	f/f	+/+	straight	DEL	No	No
HLF	JMJD1C--NRBF2	NRBF2	chr10	64897409	JMJD1C	chr10	65140077	33	15	28	281.03	f/f	+/-	inverted	DEL	No	No
HLF	RP11-307P5.1--SASH1	RP11-307P5.1	chr6	147981954	SASH1	chr6	148711269	10	17	12	129.04	f/f	+/+	straight	DEL	No	No
Huh6	PHLDB2--PLCXD2	PLCXD2	chr3	111451549	PHLDB2	chr3	111632165	3	17	3	855.36	f/f	+/+	straight	DEL	No	No
Huh6	GCN1--P2RX7	GCN1	chr12	120599683	P2RX7	chr12	121576100	8	12	6	285.61	r/r	NA/+	NA	DUP	No	No
Huh6	RNF5--RNF5P1	RNF5	chr6	32146568	RNF5P1	chr8	38458580	2	45	0	-114.02	f/r	+/-	straight	TRANS	No	No
Huh6	PUDP--RP11-120D5.1	RP11-120D5.1	chrX	11074055	PUDP	chrX	7023878	6	3	4	341.93	r/r	-/NA	NA	DEL	No	No
Li7	MMP26--OR51B5	MMP26	chr11	4805542	OR51B5	chr11	5367002	4	3	3	78.92	f/f	+/-	inverted	DEL	No	No
Li7	METTL24--WASF1	METTL24	chr6	110636544	WASF1	chr6	110448831	8	14	4	434.46	r/r	-/-	straight	DEL	No	No
Li7	ANO1--PPFIA1	ANO1	chr11	69973582	PPFIA1	chr11	70117608	28	6	31	461.36	f/r	+/+	inverted	INV	No	No
Li7	IMMP2L--KMT2E	KMT2E	chr7	104707253	IMMP2L	chr7	110325040	14	5	15	348.74	f/f	+/-	inverted	DEL	No	No
Li7	PRH1-PRR4--SMIM10L1	PRH1-PRR4	chr12	11001005	SMIM10L1	chr12	11324020	11	11	14	340.59	f/f	NA/NA	NA	DEL	No	No
Li7	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	2	7	2	338.88	f/f	NA/+	NA	DEL	No	No
Li7	MAP3K13--SENP2	MAP3K13	chr3	185184750	SENP2	chr3	185307901	10	2	7	303.82	f/f	+/+	straight	DEL	Yes	No
Li7	SRGAP1--TMEM5	SRGAP1	chr12	64238662	TMEM5	chr12	64174798	50	91	1	853.76	f/f	+/+	straight	DUP	No	No
Li7	PPFIA1--SHANK2	PPFIA1	chr11	70172923	SHANK2	chr11	70412728	17	11	21	321.28	f/r	+/-	straight	INV	No	No
Li7	AL121578.2--SYTL5	AL121578.2	chrX	37765403	SYTL5	chrX	37913465	11	10	5	483.81	f/f	+/+	straight	DEL	No	No
Li7	BPIFB4--SAMM50	SAMM50	chr22	44360430	BPIFB4	chr20	31688229	136	16	31	697.18	f/f	+/+	straight	TRANS	No	No
Li7	PRH1--SMIM10L1	PRH1	chr12	11126319	SMIM10L1	chr12	11324020	19	9	9	343.02	f/f	-/NA	NA	DEL	No	No
Li7	ANO1-AS2--SHANK2	SHANK2	chr11	70505932	ANO1-AS2	chr11	69919044	3	2	6	337.14	r/r	-/-	straight	DEL	No	No
Huh1	CSMD3--RNF139-AS1	CSMD3	chr8	113998603	RNF139-AS1	chr8	125486327	9	7	10	206.25	r/f	-/-	inverted	INV	Yes	No
Huh1	DPY19L2P2--PMPCB	DPY19L2P2	chr7	102835514	PMPCB	chr7	102937904	5	2	5	-179.65	f/f	-/+	inverted	DEL	No	No
Huh1	PRPF3--RPRD2	PRPF3	chr1	150300924	RPRD2	chr1	150437002	4	2	4	328.61	f/f	+/+	straight	DEL	No	No
Huh1	BAGE4--MIB1	MIB1	chr18	19359643	BAGE4	chr21	11039430	6	10	8	345.92	f/f	+/NA	NA	TRANS	No	No
Huh1	MSC--PPP1R42	PPP1R42	chr8	67876568	MSC	chr8	72756656	19	17	24	366.34	f/r	-/-	inverted	INV	No	No
Huh1	CLPTM1L--PLEKHG4B	CLPTM1L	chr5	1330394	PLEKHG4B	chr5	113365	6	13	5	322.44	r/f	-/+	straight	INV	No	No
Huh1	FCRL4--METTL13	METTL13	chr1	171755217	FCRL4	chr1	157559247	7	4	8	285.75	f/r	+/-	straight	INV	Yes	No
Huh1	FAM49B--KCNQ3	FAM49B	chr8	130983188	KCNQ3	chr8	133222571	10	2	0	271.29	r/r	-/-	straight	DUP	No	No
Huh1	C11orf88--SIK2	SIK2	chr11	111491125	C11orf88	chr11	111404470	19	20	0	462.73	f/f	+/+	straight	DUP	No	No
Huh1	PRR16--RP11-574H6.1	RP11-574H6.1	chr5	119722621	PRR16	chr5	119952789	12	5	3	392.27	f/f	-/+	inverted	DEL	No	No
Huh1	EMG1--SLC4A8	EMG1	chr12	7084537	SLC4A8	chr12	51864173	3	16	5	381.9	f/f	+/+	straight	DEL	No	No
Huh1	LPCAT3--SLC4A8	LPCAT3	chr12	7086080	SLC4A8	chr12	51864174	10	15	12	435.21	f/f	-/+	inverted	DEL	No	No
Huh1	EFR3A--FAM49B	FAM49B	chr8	130983188	EFR3A	chr8	132945681	4	9	0	262.05	r/r	-/+	inverted	DUP	No	No
Huh1	CACNA1E--PCMTD1	PCMTD1	chr8	52744003	CACNA1E	chr1	181620473	5	2	4	157.14	r/f	-/+	straight	TRANS	No	No
Huh1	NTN1--SPECC1	SPECC1	chr17	20013874	NTN1	chr17	9124484	32	9	0	514.3	f/f	+/+	straight	DUP	Yes	No
Huh1	FGFR1--NSD3	FGFR1	chr8	38314873	NSD3	chr8	38173559	32	62	40	669.99	r/r	-/NA	NA	DEL	Yes	No
Huh1	LYN--NCOA2	NCOA2	chr8	71314398	LYN	chr8	56922465	104	200	141	411.05	r/f	-/+	straight	INV	Yes	No
Huh1	LIX1L--RALGPS2	RALGPS2	chr1	178694553	LIX1L	chr1	145487303	5	5	4	-41.69	f/r	+/+	inverted	INV	No	No
JHH1	EVX1-AS--SYNRG	SYNRG	chr17	35913216	EVX1-AS	chr7	27284666	59	5	51	261.9	r/f	-/-	inverted	TRANS	No	No
JHH1	BRAF--PARP12	PARP12	chr7	139746682	BRAF	chr7	140449216	8	2	0	500.76	r/r	-/-	straight	DUP	Yes	No
JHH1	CD300LD--UNK	CD300LD	chr17	72585512	UNK	chr17	73814491	18	31	10	420.98	r/r	-/+	inverted	DUP	No	No
JHH1	AC079610.1--ERBB4	ERBB4	chr2	212812154	AC079610.1	chr2	213573413	15	5	1	233.71	r/r	-/-	straight	DUP	Yes	No
JHH1	LINC01091--RP11-381N20.2	RP11-381N20.2	chr4	124418098	LINC01091	chr4	124573941	29	31	16	609.94	f/f	+/NA	NA	DEL	No	No
JHH1	CCDC148--CIC	CIC	chr19	42798155	CCDC148	chr2	159150615	74	24	70	598.98	f/f	+/-	inverted	TRANS	Yes	No
JHH1	CA5BP1--GS1-594A7.3	CA5BP1	chrX	15693900	GS1-594A7.3	chrX	15639134	7	4	7	362.72	f/f	+/+	straight	DUP	No	No
JHH1	ZNF787--ZSCAN5B	ZNF787	chr19	56632540	ZSCAN5B	chr19	56709288	50	10	1	3.24	r/r	-/-	straight	DUP	No	No
JHH1	BCAR3--ZCCHC17	BCAR3	chr1	94240754	ZCCHC17	chr1	31836876	7	5	7	263.34	r/f	-/+	straight	INV	No	No
JHH1	ADCY5--OSBPL11	ADCY5	chr3	123104688	OSBPL11	chr3	125279222	26	9	26	470.26	r/f	-/-	inverted	INV	No	No
JHH1	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	2	16	2	375.24	r/r	-/-	straight	DEL	No	No
JHH1	AGO2--STRN3	AGO2	chr8	141554311	STRN3	chr14	31381387	20	13	23	435.78	r/r	-/-	straight	TRANS	No	No
JHH1	AGAP1--EXOSC3	AGAP1	chr2	236659131	EXOSC3	chr9	37784059	14	10	13	809.29	f/r	+/-	straight	TRANS	No	No
JHH1	CEP55--MYOF	MYOF	chr10	95180419	CEP55	chr10	95266812	18	4	5	268.82	r/r	-/+	inverted	DUP	No	No
JHH1	CLINT1--CTC-436K13.6	CLINT1	chr5	157236635	CTC-436K13.6	chr5	157661352	9	9	1	409.6	r/r	-/-	straight	DUP	No	No
JHH1	IQSEC3--WNK1	WNK1	chr12	922979	IQSEC3	chr12	234798	23	7	3	133.24	f/f	+/+	straight	DUP	No	No
JHH2	NEO1--TUBGCP5	TUBGCP5	chr15	22883157	NEO1	chr15	73470766	29	25	17	404.49	r/r	+/+	straight	DUP	No	No
JHH2	LOC101929371--RBL1	RBL1	chr20	35635813	LOC101929371	chr20	9987160	12	6	7	347.93	r/f	+/NA	NA	INV	No	No
JHH2	ARHGAP5--NUBPL	ARHGAP5	chr14	32563591	NUBPL	chr14	32315676	44	20	5	526.27	f/f	+/+	straight	DUP	Yes	No
JHH2	MKL1--TNRC6B	TNRC6B	chr22	40463928	MKL1	chr22	40915467	9	2	4	242.5	f/f	+/-	inverted	DEL	Yes	No
JHH2	CCDC146--FBXL13	FBXL13	chr7	102462486	CCDC146	chr7	76796928	4	4	2	217.7	r/f	-/+	straight	INV	No	No
JHH2	EIF3B--IQCE	IQCE	chr7	2617988	EIF3B	chr7	2418323	88	46	76	633.52	f/f	+/+	straight	DUP	No	No
JHH2	CTD-2277K2.1--FLJ22447	CTD-2277K2.1	chr14	62394688	FLJ22447	chr14	62117679	7	3	0	153.17	f/f	+/NA	NA	DUP	No	No
JHH2	GAB2--ZFAND3	ZFAND3	chr6	37787791	GAB2	chr11	77991946	7	3	7	-210.04	f/r	+/-	straight	TRANS	No	No
JHH2	MBNL3--RAP2C	MBNL3	chrX	131563840	RAP2C	chrX	131352864	2	21	3	275.33	r/r	-/-	straight	DEL	No	No
JHH2	PATJ--SGIP1	PATJ	chr1	62545237	SGIP1	chr1	67142801	8	2	2	345.45	f/r	NA/+	NA	INV	No	No
JHH2	PDE4B--SGIP1	PDE4B	chr1	66391890	SGIP1	chr1	67132538	9	8	3	377.02	f/f	+/+	straight	DEL	No	No
JHH2	FARP1--STK24	FARP1	chr13	98811242	STK24	chr13	99118499	36	32	32	561.44	f/f	+/-	inverted	DEL	No	No
JHH2	CYP1B1--PTPN1	PTPN1	chr20	49127126	CYP1B1	chr2	38298452	12	8	14	153.19	f/r	+/-	straight	TRANS	No	No
JHH2	KLHL20--SRGAP2	KLHL20	chr1	173703424	SRGAP2	chr1	206628223	3	4	4	399.6	f/f	+/+	straight	DEL	No	No
JHH4	ATM--RP11-94P11.4	ATM	chr11	108142132	RP11-94P11.4	chr11	105366971	3	5	4	315.09	f/r	+/-	straight	INV	Yes	Yes
JHH4	CDK14--MAN2A1	MAN2A1	chr5	109191034	CDK14	chr7	90675211	60	6	21	631.49	f/f	+/+	straight	TRANS	No	No
JHH4	GOLGA7B--ZFYVE27	ZFYVE27	chr10	99512938	GOLGA7B	chr10	99627488	64	46	111	657.74	f/f	+/+	straight	DEL	No	No
JHH4	LINC00511--LINC00673	LINC00511	chr17	70332805	LINC00673	chr17	70588341	16	5	11	363.18	r/f	-/NA	NA	INV	No	No
JHH4	LINC01605--NRG1	NRG1	chr8	32474402	LINC01605	chr8	37279086	26	11	18	339.75	f/r	+/NA	NA	INV	Yes	No
JHH4	AC002066.1--ADAM22	ADAM22	chr7	87607726	AC002066.1	chr7	116067375	40	8	35	533.93	f/f	+/-	inverted	DEL	No	No
JHH4	OPCML--TMEM123	TMEM123	chr11	102319542	OPCML	chr11	133079495	23	3	19	412.35	r/f	-/-	inverted	INV	No	No
JHH5	EML1--SETD3	EML1	chr14	100259879	SETD3	chr14	99880270	10	2	9	-115.85	f/r	+/-	straight	INV	No	No
JHH5	LINC02015--SHROOM3	LINC02015	chr3	177600386	SHROOM3	chr4	77357372	19	9	15	559.14	f/r	NA/+	NA	TRANS	No	No
JHH5	CCT5--FAM173B	FAM173B	chr5	10248415	CCT5	chr5	10262729	6	3	5	349.81	r/r	-/+	inverted	DUP	No	No
JHH5	CAMTA1--RERE	CAMTA1	chr1	7501240	RERE	chr1	8482786	13	3	4	491.75	f/f	+/-	inverted	DEL	Yes	No
JHH6	CCT3--TSACC	CCT3	chr1	156303380	TSACC	chr1	156308027	2	8	0	601.6	r/r	-/+	inverted	DUP	No	No
JHH6	LOC101928272--PHYH	LOC101928272	chr10	9320450	PHYH	chr10	13325689	16	10	11	506.22	r/f	NA/-	NA	INV	No	No
JHH6	PRR16--RP11-574H6.1	RP11-574H6.1	chr5	119722621	PRR16	chr5	119952789	11	3	3	517.27	f/f	-/+	inverted	DEL	No	No
JHH6	CDKN2A--CDKN2B-AS1	CDKN2B-AS1	chr9	22029592	CDKN2A	chr9	21968240	18	7	15	446.11	f/r	+/-	straight	INV	Yes	Yes
JHH7	MYO6--SENP6	SENP6	chr6	76380435	MYO6	chr6	76527217	18	21	12	610.86	f/f	+/+	straight	DEL	No	No
JHH7	TVP23C--TVP23C-CDRT4	TVP23C	chr17	15449098	TVP23C-CDRT4	chr17	15341516	7	44	6	476.06	r/r	-/-	straight	DEL	No	No
JHH7	C22orf39--HIRA	C22orf39	chr22	19431534	HIRA	chr22	19319078	26	5	25	291.64	r/r	-/-	straight	DEL	No	No
JHH7	AL121578.2--SYTL5	AL121578.2	chrX	37766092	SYTL5	chrX	37892786	3	15	7	510.91	f/f	+/+	straight	DEL	No	No
JHH7	AP3D1--MKNK2	MKNK2	chr19	2041038	AP3D1	chr19	2102266	10	18	5	634.52	r/r	-/-	straight	DUP	No	No
JHH7	DUSP6--POC1B	POC1B	chr12	89860546	DUSP6	chr12	89743337	2	6	2	423.96	r/r	-/-	straight	DEL	No	No
JHH7	AC018816.3--ITPR1	ITPR1	chr3	4562777	AC018816.3	chr3	4920034	22	12	17	540.12	f/f	+/-	inverted	DEL	No	No
JHH7	CASS4--TMEM120B	TMEM120B	chr12	122150866	CASS4	chr20	54987389	4	8	3	-32.67	f/f	+/+	straight	TRANS	No	No
JHH7	PDE3A--SLCO1C1	PDE3A	chr12	20523177	SLCO1C1	chr12	20893117	11	12	16	473.1	f/f	+/+	straight	DEL	No	No
JHH7	LOC105371907--SEPT9	LOC105371907	chr17	75277635	set-09	chr17	75486823	40	39	38	23.18	f/f	NA/+	NA	DEL	Yes	No
JHH7	CTSC--RAB38	CTSC	chr11	88033697	RAB38	chr11	87883122	13	15	8	363.31	r/r	-/-	straight	DEL	No	No
JHH7	DEPDC1B--PDE4D	DEPDC1B	chr5	59934576	PDE4D	chr5	59284543	6	5	7	365.19	r/r	-/-	straight	DEL	No	No
JHH7	C16orf70--CBFB	C16orf70	chr16	67178278	CBFB	chr16	67132612	87	39	44	600.84	f/f	+/+	straight	DUP	Yes	No
JHH7	LINC01508--RAPGEF1	LINC01508	chr9	93131094	RAPGEF1	chr9	134497182	62	66	42	345.84	r/f	NA/-	NA	INV	No	No
JHH7	GNPNAT1--TXNDC16	GNPNAT1	chr14	53258145	TXNDC16	chr14	53011088	4	6	4	115.79	r/r	-/-	straight	DEL	No	No
SNU354	BNC2--C9orf92	BNC2	chr9	16410943	C9orf92	chr9	16215896	25	20	25	440.69	r/r	-/-	straight	DEL	No	No
SNU354	HSPE1-MOB4--SF3B1	SF3B1	chr2	198281464	HSPE1-MOB4	chr2	198375770	40	11	16	386.78	r/r	-/+	inverted	DUP	Yes	No
SNU354	KLF13--LINC02352	KLF13	chr15	31665746	LINC02352	chr15	31515955	7	6	6	443.84	f/f	+/NA	NA	DUP	No	No
SNU368	AKR1C2--AKR1C3	AKR1C2	chr10	5034022	AKR1C3	chr10	5147786	3	15	2	494.04	r/f	-/+	straight	INV	No	No
SNU368	AGPS--IFI16	AGPS	chr2	178285085	IFI16	chr1	158979792	11	3	0	411.25	f/f	+/+	straight	TRANS	No	No
SNU368	ATF2--CHN1	ATF2	chr2	175945387	CHN1	chr2	175816929	8	6	3	337.46	r/r	-/-	straight	DEL	Yes	No
SNU368	CCDC141--TTC21B	TTC21B	chr2	166792688	CCDC141	chr2	179838115	18	14	16	568.36	r/f	-/-	inverted	INV	No	No
SNU368	DCAF17--HOXD11	DCAF17	chr2	172314584	HOXD11	chr2	176973634	25	8	11	431.94	f/f	+/+	straight	DEL	Yes	No
SNU368	ARNT--PI4KB	ARNT	chr1	150807720	PI4KB	chr1	151274319	4	3	3	36.31	r/f	-/-	inverted	INV	Yes	No
SNU368	ATG4C--RP11-230B22.1	RP11-230B22.1	chr1	63154394	ATG4C	chr1	63269389	4	3	4	99.25	f/f	+/+	straight	DEL	No	No
SNU368	NIT1--SCN2A	SCN2A	chr2	166237385	NIT1	chr1	161092120	2711	200	2051	635.6	f/f	+/+	straight	TRANS	No	No
SNU368	ATF6--GBA	ATF6	chr1	161833101	GBA	chr1	155210951	8	3	3	887.59	f/r	+/-	straight	INV	No	No
SNU739	OSBPL8--SYT1	SYT1	chr12	79693331	OSBPL8	chr12	76772328	13	6	9	467.84	f/r	+/-	straight	INV	No	No
SNU739	AKAP2--PALM2-AKAP2	PALM2-AKAP2	chr9	112778265	AKAP2	chr9	112898406	2	74	2	363.43	f/f	+/+	straight	DEL	No	No
SNU739	LRCH1--RP11-189B4.7	RP11-189B4.7	chr13	47067094	LRCH1	chr13	47224335	4	7	1	326.17	f/f	NA/+	NA	DEL	No	No
SNU739	CNR1--RP11-459O1.2	RP11-459O1.2	chr6	89033718	CNR1	chr6	88855055	9	4	4	222.74	r/r	-/-	straight	DEL	No	No
SNU739	LINC01237--LINC01881	LINC01881	chr2	243037177	LINC01237	chr2	242996217	4	8	4	281.2	f/f	NA/NA	NA	DUP	No	No
SNU739	GNE--XRRA1	XRRA1	chr11	74562132	GNE	chr9	36227454	11	7	4	484.47	r/r	-/-	straight	TRANS	No	No
SNU739	PREX1--RP5-906C1.1	RP5-906C1.1	chr20	47465971	PREX1	chr20	47364416	23	3	23	441.84	r/r	NA/-	NA	DEL	No	No
SNU739	LOXL2--PLCXD2	LOXL2	chr8	23261466	PLCXD2	chr3	111451465	14	22	6	241.99	r/f	-/+	straight	TRANS	No	No
SNU739	GNE--SIPA1	GNE	chr9	36227244	SIPA1	chr11	65412425	7	11	10	500.43	r/f	-/+	straight	TRANS	No	No
SNU739	CDX2--UBA6	UBA6	chr4	68543328	CDX2	chr13	28539151	4	5	2	201.81	r/r	-/-	straight	TRANS	Yes	No
SNU761	OLFML2A--TAOK1	TAOK1	chr17	27718041	OLFML2A	chr9	127549253	5	9	10	31.17	f/f	+/+	straight	TRANS	No	No
SNU761	RP11-351I24.1--SBF2	RP11-351I24.1	chr11	10324842	SBF2	chr11	10215533	4	4	3	308.23	r/r	-/-	straight	DEL	No	No
SNU761	MBNL3--RAP2C	MBNL3	chrX	131563840	RAP2C	chrX	131352864	5	13	5	361.89	r/r	-/-	straight	DEL	No	No
SNU761	MYBL1--STAU2	STAU2	chr8	74439924	MYBL1	chr8	67488608	4	7	5	409.14	r/r	-/-	straight	DEL	No	No
SNU761	FGFR1--FSIP1	FGFR1	chr8	38314873	FSIP1	chr15	40005781	16	28	10	447.95	r/r	-/-	straight	TRANS	Yes	No
SNU761	CCDC7--ITGB1	CCDC7	chr10	33039665	ITGB1	chr10	33197295	7	4	6	265.23	f/f	+/-	inverted	DEL	No	No
SNU761	AL121578.2--SYTL5	AL121578.2	chrX	37765403	SYTL5	chrX	37913465	4	3	3	339.59	f/f	+/+	straight	DEL	No	No
SNU761	BIRC6--TTC27	BIRC6	chr2	32836648	TTC27	chr2	33002948	8	14	5	580.12	f/f	+/+	straight	DEL	Yes	No
SNU878	CDH7--RP11-775G23.1	RP11-775G23.1	chr18	63310004	CDH7	chr18	63429882	10	7	6	451.7	f/f	+/+	straight	DEL	No	No
SNU878	ASPH--RP11-705O24.1	ASPH	chr8	62555446	RP11-705O24.1	chr8	62718419	9	2	0	101.72	r/r	-/+	inverted	DUP	No	No
SNU878	ALDH3B1--UNC93B1	ALDH3B1	chr11	67782928	UNC93B1	chr11	67767149	27	6	29	496.49	f/r	+/-	straight	INV	No	No
SNU878	AXIN1--LUC7L	AXIN1	chr16	380490	LUC7L	chr16	258186	4	4	5	397.17	r/r	-/-	straight	DEL	Yes	Yes
SNU878	LINC01116--OLA1	LINC01116	chr2	177502189	OLA1	chr2	175006727	12	9	9	66.53	r/r	NA/-	NA	DEL	No	No
SNU878	LMO3--MGST1	MGST1	chr12	16520398	LMO3	chr12	16742461	4	2	4	221.46	f/f	+/-	inverted	DEL	No	No
SNU886	ABCD4--LINC02274	ABCD4	chr14	74766250	LINC02274	chr14	74290194	3	6	4	342.02	r/r	-/NA	NA	DEL	No	No
SNU886	GALNT7--LOC101930370	LOC101930370	chr4	174090111	GALNT7	chr4	174213258	4	4	4	146.08	f/f	NA/+	NA	DEL	No	No
SNU886	IGHMBP2--RP11-757G1.5	IGHMBP2	chr11	68707237	RP11-757G1.5	chr11	68709450	5	2	4	335.76	f/r	+/-	straight	INV	No	No
SNU886	BMPER--NPSR1-AS1	BMPER	chr7	34125703	NPSR1-AS1	chr7	34664346	193	118	188	748.05	f/f	+/-	inverted	DEL	No	No
SNU886	BNC2--C9orf92	BNC2	chr9	16410943	C9orf92	chr9	16215896	10	11	7	385.79	r/r	-/-	straight	DEL	No	No
MHCC97H	CCDC146--FBXL13	FBXL13	chr7	102462486	CCDC146	chr7	76796928	7	3	4	188.81	r/f	-/+	straight	INV	No	No
MHCC97H	CEP250--MROH8	CEP250	chr20	34079168	MROH8	chr20	35752204	10	10	8	388.26	f/r	+/-	straight	INV	No	No
MHCC97H	APOH--PRKCA	APOH	chr17	64216253	PRKCA	chr17	64302244	65	8	12	501.64	r/r	-/+	inverted	DUP	No	No
MHCC97H	NDRG3--PLCB1	PLCB1	chr20	8197433	NDRG3	chr20	35284802	2	5	4	486.79	f/f	+/-	inverted	DEL	No	No
MHCC97H	CAV1--LINC01510	CAV1	chr7	116166742	LINC01510	chr7	116204221	9	14	10	293.59	f/r	+/NA	NA	INV	No	No
MHCC97H	BCAS1--NDRG3	NDRG3	chr20	35284899	BCAS1	chr20	52561534	27	7	0	593.08	r/r	-/-	straight	DUP	No	No
MHCC97H	ASB7--DPH6-AS1	DPH6-AS1	chr15	36144514	ASB7	chr15	101143517	12	10	14	427.73	f/r	+/+	inverted	INV	No	No
MHCC97H	CCL26--HIP1	HIP1	chr7	75368117	CCL26	chr7	75401570	5	5	0	-109.61	r/r	-/-	straight	DUP	Yes	No