Cell line Transcriptomic subgroup Doxorubicin Entinostat Alvespimycin Tanespimycin Bortezomib Selumetinib Trametinib Linsitinib Dasatinib Nutlin-3 Navitoclax Tivantinib Rapamycin PF-04691502 Paclitaxel Vinblastine JNJ-38877605 PHA-665752 BLU-9931 Brivanib Regorafenib Refametinib ICG-001 Decitabine Sorafenib Sorafenib_MK-2206 MK-2206 Resminostat Sorafenib_Resminostat Alisertib CD532 Lenvatinib Cabozantinib Sorafenib_Trametinib Sorafenib_Refametinib Huh7 CL1 0.413 10 0.053 0.106 0.07 10 10 10 10 10 10 0.55 2.677 0.177 0.005 0.009 10 5.356 1.4 10 6 0.125 10 10 5.65 2.8 4.3 4.65 3 0.11 0.351 2.97 7.54 0.42 NA SNU739 CL3 2.907 9.347 0.44 4.93 0.008 10 10 10 10 10 10 0.595 10 1.205 0.004 0.047 10 4.777 10 10 10 10 10 10 7.789 5.641 10 5.69 2.881 0.547 0.593 10 10 5.61 9.05 Hep3B CL1 0.26 10 0.29 2.055 0.013 10 0.077 9.872 10 10 4.34 10 10 0.42 0.032 6.679 6.679 2.953 10 10 10 3.8 8.55 10 6.333 3.533 6.633 8.7 6.467 5.328 0.4 10 9.832 0.08 0.77 Huh6 CL1 0.152 5.71 0.378 2.45 0.027 10 10 9.49 5.025 10 3.365 0.545 10 0.64 0.003 0.006 10 5.498 10 10 10 10 9.65 10 4.826 3.254 4.67 4.656 1.66 10 5.037 10 2.316 1.49 1.50 HepG2 CL1 0.83 8.03 0.025 0.047 0.054 10 0.008 10 10 10 10 10 10 10 0.098 10 10 4.173 9.6 10 10 10 10 10 2.5 3.1 10 7.633 4.633 10 0.025 10 10 0.001 0.09 HepaRG CL2 0.22 2.73 0.56 1.175 0.005 10 0.016 10 0.06 10 0.089 0.305 10 0.325 0.007 0.037 10 4.073 8.4 10 10 1.8 10 10 6.55 2.45 2.4 4.05 5.25 10 1.119 10 5.237 0.02 0.29 HLE CL3 0.635 10 0.094 0.25 0.006 10 10 10 10 10 10 0.21 10 0.575 0.024 0.024 10 6.067 9.1 10 10 10 10 10 3.65 3.9 8.7 5.3 2.7 0.461 0.282 10 10 6.45 7.47 HLF CL3 0.765 10 0.083 0.285 0.013 10 10 10 10 10 10 0.805 10 6.195 0.024 0.022 10 5.581 10 10 10 10 10 10 6.927 5.235 10 5.145 3.843 0.466 0.612 10 10 10.00 10.00 SNU182 CL3 0.215 10 1.785 6.715 0.23 10 10 10 1.48 10 8.93 5.625 10 2.28 0.374 0.015 10 6.005 10 10 10 10 10 10 9.245 2.368 6.266 9.75 4.4 10 1.559 10 10 5.96 4.71 SNU387 CL3 0.835 10 0.245 2.76 0.024 10 10 10 10 10 10 5.705 10 1.015 0.345 5.109 10 5.258 5.65 10 10 10 9.767 10 9.167 3.85 7.05 10 5.35 10 1.09 10 10 0.10 1.03 SNU398 CL3 0.185 10 0.4 0.71 0.053 10 10 10 8.935 10 8.485 1.08 5.011 0.29 0.003 0.013 10 4.609 9.6 10 10 10 10 10 5.115 5.102 10 9.24 5.699 0.188 0.237 10 7.8 2.18 2.11 SNU423 CL3 0.128 10 0.965 3.655 0.029 10 10 6.38 10 10 4.44 1.11 10 0.41 0.004 0.021 10 5.115 9.3 10 10 10 10 10 7.619 4.886 4.921 6.137 3.371 10 0.729 10 10 3.14 2.53 SNU449 CL3 3 10 3.56 10 0.02 10 10 10 10 10 10 10 10 0.455 5.324 5.285 10 5.493 10 10 9.75 10 10 10 6.768 4.026 8.196 10 4.615 10 1.392 10 10 3.58 4.02 SNU475 CL3 4.817 10 0.168 10 0.042 10 10 10 10 10 5.038 1.07 10 0.833 0.804 3.555 10 10 10 10 10 10 10 10 8.141 5.457 9.668 10 7.031 10 1.397 10 10 9.67 10.00 PLC/PRF5 CL1 0.795 10 0.033 0.078 0.038 10 10 10 10 10 10 3.34 10 0.195 0.012 0.035 10 4.129 10 10 10 10 10 10 10 4.9 10 6.85 5.35 10 2.128 10 10 9.09 8.32 Mahlavu CL3 0.335 10 0.285 1.535 0.003 10 10 10 6.41 10 5.225 2.77 10 0.415 0.008 0.028 10 5.095 10 10 10 10 10 10 6.493 4.931 5.608 5.794 3.775 1.881 0.516 10 10 6.56 7.42 Li7 CL2 0.75 5.345 0.23 0.75 0.195 10 0.51 10 0.73 10 0.79 10 5.15 0.195 0.469 5.104 10 5.238 10 10 3.9 10 10 10 1.845 1.715 9.848 3.345 0.728 10 0.605 10 6.405 0.80 1.23 HCC-3 CL1 0.13 8.055 0.75 1.875 0.009 10 10 2.465 10 10 1.575 0.9 5.72 0.165 0.423 1.034 10 1.158 8.8 10 10 10 8.267 10 5.433 1.45 2.9 5.85 4.15 3.106 1.228 10 0.5439 2.22 2.31 B1 CL1 2.01 3.78 0.785 2.395 0.003 10 10 0.14 5.49 10 0.825 0.775 0.52 0.164 0.008 0.035 10 5.116 2.85 10 10 10 10 10 1.35 0.5 1.8 6.15 0.7 0.678 1.001 10 0.6266 0.02 0.99 HCC-1.1 CL3 0.635 10 0.081 0.17 0.007 10 1.055 10 2.48 10 4.59 0.105 10 0.375 0.021 0.005 10 4.383 4.75 10 10 10 10 10 7.526 2.844 3.923 6.214 4.485 0.145 1.655 10 3.505 0.72 1.44 HCC-1.2 CL1 0.41 9.275 0.05 0.14 0.02 9.725 0.047 8.045 0.285 10 1.555 0.615 10 0.175 0.005 0.009 10 5.198 4.867 10 10 2.15 10 10 6.467 2.4 4.15 5.5 3.55 10 4.275 10 8.101 0.03 0.54 Huh1 CL1 1.175 3.79 0.118 0.21 0.054 10 10 5.615 10 10 10 10 10 0.48 0.02 0.067 10 5.136 10 10 10 10 10 10 6.969 2.132 4.383 3.407 3.452 10 0.36 10 10 8.39 7.87 JHH1 Unclassified 2.645 8.26 0.52 1.195 0.006 0.235 0.008 10 0.02 10 6.935 10 10 0.16 0.052 0.036 10 5.617 7.433 10 10 0.45 9.65 10 10 1.633 1.567 0.767 1.1 10 0.352 10 10 0.01 0.33 JHH2 CL2 0.77 10 10 10 0.095 10 10 10 10 10 10 10 10 0.465 5.124 0.098 10 4.739 10 10 10 10 9.95 10 9.792 6.216 10 5.491 4.184 10 4.781 10 10 0.16 1.23 JHH4 CL3 0.18 3.925 1.57 7.843 0.03 10 10 10 0.145 10 5.085 0.353 10 0.11 0.045 0.032 10 5.544 10 10 10 10 10 10 5.495 2.157 6.427 10 4.913 1.167 2.314 7.02 2.111 0.53 1.68 JHH5 CL1 0.54 5.575 0.026 0.032 0.015 5.365 0.022 3.927 3.585 10 4.68 0.42 9.485 0.24 0.012 0.049 10 2.714 10 10 10 1.8 10 10 1.9 0.425 2.15 4.2 0.88 0.701 0.366 10 4.418 0.01 0.24 JHH6 CL3 0.367 9.927 0.47 1.143 0.076 10 10 10 10 10 10 0.755 8.485 0.59 0.006 0.061 10 4.137 10 10 10 10 10 10 7.55 3.55 4.25 10 5.65 6.241 0.313 10 10 5.52 6.99 JHH7 CL1 0.55 10 0.092 0.19 0.025 10 7.52 5.32 8.54 10 6.465 0.345 10 0.775 0.005 0.008 10 5.094 2.15 10 10 10 10 10 4.16 1.312 4.277 3.54 1.074 0.62 0.58 6.54 9.402 1.84 2.41 SNU354 CL2 4.53 5.995 0.425 1.005 0.01 10 8.49 10 7.025 10 3.56 0.605 10 0.49 0.226 3.371 10 5.364 10 10 10 10 10 10 3.027 2.444 5.216 2.136 0.515 10 3.014 10 10 1.06 2.02 SNU368 CL2 5.885 10 0.245 5.89 0.097 10 10 10 7.25 10 10 2.05 10 1.07 10 10 10 6.483 9.6 10 10 10 10 10 7.532 4.832 7.991 9.441 5.448 10 1.593 10 10 9.07 9.47 SNU761 CL2 1.51 10 2.61 10 0.052 10 0.305 10 10 10 10 10 10 0.9 10 10 10 5.505 10 10 10 9.55 10 10 9.237 4.604 9.479 7.507 3.05 10 5.314 10 10 0.12 1.31 SNU878 CL2 1 8.525 1.21 0.623 0.03 6.727 0.08 10 10 10 0.21 0.086 10 0.165 0.03 0.01 10 5.767 10 10 10 2.9 10 10 10 5.733 10 7.659 6.083 0.473 1.862 10 10 NA 1.92 SNU886 CL2 0.8 10 0.21 1.033 0.025 10 2.49 10 0.78 10 2.525 0.5 9.025 0.135 0.02 0.013 10 5.435 8.95 10 10 10 10 10 7.476 5.364 10 7.5 5.145 7.294 1.39 10 10 0.04 0.54 MHCC97H CL2 5.855 10 0.39 1.32 0.024 10 10 10 10 10 10 0.915 10 0.66 0.079 0.06 0.083 0.154 7.5 10 10 10 10 10 10 3.076 2.435 3.31 2.715 10 3.65 10 0.0772 2.37 4.66